getAllNodesR Documentation

getAllNodes

Description

Retrieve the identifiers of all the nodes in the current graph - a list of strings.

Usage

getAllNodes(obj)

Arguments

obj a CytoscapeWindowClass object.

Value

A list of character strings. Note that node names are returned – their original and primary identifiers – and that these may be different from the node labels that you see when you look at the graph in Cytoscape.

Author(s)

Paul Shannon

Examples

  cw <- CytoscapeWindow ('getAllNodes.test', graph=makeSimpleGraph())
  getAllNodes (cw)
    #  [1] "C" "B" "A"