getLayoutPropertyValueR Documentation

getLayoutPropertyValue

Description

Returns the appropriately typed value of the specified tunable property for the specified layout.

Usage

getLayoutPropertyValue(obj, layout.name, property.name)

Arguments

obj a CytoscapeConnectionClass object.
layout.name a string object.
property.name a string object.

Value

Typically an integer, numeric or string value, the current setting of this property for this layout.

Author(s)

Paul Shannon

See Also

layoutNetwork getLayoutNames getLayoutNameMapping getLayoutPropertyNames getLayoutPropertyType setLayoutProperties

Examples

  cy <- CytoscapeConnection ()
  prop.names <- getLayoutPropertyNames (cy, 'isom')
  print (prop.names)
    #  "maxEpoch" "sizeFactor" "radiusConstantTime"   "radius"  "minRadius" "initialAdaptation"  "minAdaptation" "coolingFactor" 
  sapply (prop.names, function (pn) getLayoutPropertyValue (cy, 'isom', 'coolingFactor'))
    #        maxEpoch         sizeFactor radiusConstantTime             radius          minRadius  initialAdaptation      minAdaptation      coolingFactor 
    #            2                  2                  2                  2                  2                  2                  2                  2