| new.CytoscapeWindow | R Documentation |
The constructor for the CytoscapeWindowClass
new.CytoscapeWindow(title, graph = new("graphNEL", edgemode='directed'), host = "localhost", rpcPort = 9000, create.window = TRUE)
title |
A character string, this is the name you will see on the Cytoscape network window. Multiple windows with the same name are not permitted. |
graph |
A Bioconductor graph. |
host |
Defaults to 'localhost', this is the domain name of a machine which is running Cytoscape with the appropriate XMLRPC server plugin. |
rpcPort |
Defaults to 9000, this may be any port to which the CytoscapeRPC server is listening. |
create.window |
Defaults to TRUE, but if you want a CytoscapeWindow just to call what in Java we would call 'class methods' – getWindowList () for instance, a CytoscapeWindow without an actual window can be useful. |
An object of the CytoscapeWindow Class.
Paul Shannon
CytoscapeWindow existing.CytoscapeWindow
cw <- new.CytoscapeWindow ('new.demo', new ('graphNEL'))