setNodeBorderWidthRule | R Documentation |
Specify the node attribute which controls the thickness of the nodes displayed in the graph. This is currently only a lookup mapping. An interpolated mapping will be added in the future.
setNodeBorderWidthRule(obj, node.attribute.name, attribute.values, line.widths, default.width)
obj |
a CytoscapeWindowClass object. |
node.attribute.name |
the node attribute whose values will, when this rule is applied, determine the nodeBorderWidth on each node. |
attribute.values |
observed values of the specified attribute on the nodes. |
line.widths |
the corresponding widths. |
default.width |
use this where the rule fails to apply |
None.
Paul Shannon
cw <- new.CytoscapeWindow ('setNodeBorderWidthRule.test', graph=makeSimpleGraph()) displayGraph (cw) layoutNetwork (cw, 'jgraph-spring') redraw (cw) node.attribute.values = c ('kinase', 'transcription factor', 'glycoprotein') line.widths = c (0, 8, 16) setNodeBorderWidthRule (cw, 'type', node.attribute.values, line.widths)